Given a multiset of k-mers S_k, the pseudocode of the algorithm to construct the de Bruijn graph (G) is given below. Fill in the four blanks. multiset S_k = collection of input k-mers set S_{k-1} = ϕ for every i ∈ S_k add i[1, k − 1] and i[2, k] to set S_{k-1} for every i ∈ I add the node II to G for every i ∈ S_k add the edge from III to IV in G return G

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Algorithmic Thinking in Bioinformatics · Quiz 1 · 7 Jul 2024 · May 2024 term

Question 9: Given a multiset of k-mers S_k, the pseudocode of the alg…

Question 9

+4 marksOne correct option

Given a multiset of $k$ -mers $S_k$ , the pseudocode of the algorithm to construct the de Bruijn graph (G) is given below. Fill in the four blanks.

text

1multiset S_k = collection of input k-mers
2set S_{k-1} = ϕ
3for every i ∈ S_k
4   add i[1, k − 1] and i[2, k] to set S_{k-1}
5for every i ∈ __I__
6   add the node __II__ to G
7for every i ∈ S_k
8   add the edge from __III__ to __IV__ in G
9return G

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Question 9 of 15 in the IIT Madras BS Algorithmic Thinking in Bioinformatics (Algorithmic Thinking in Bioinformatics) Quiz 1 paper sat on 7 Jul 2024, in the May 2024 term (IIT M DEGREE AN EXAM QDB2 7 July 2024). It carries 4 marks.

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